{"id":27,"date":"2021-08-02T14:01:05","date_gmt":"2021-08-02T05:01:05","guid":{"rendered":"http:\/\/sowalab.ws.hosei.ac.jp\/wp\/?page_id=27"},"modified":"2024-07-16T11:30:33","modified_gmt":"2024-07-16T02:30:33","slug":"publication","status":"publish","type":"page","link":"https:\/\/sowalab.ws.hosei.ac.jp\/wp\/publication\/","title":{"rendered":"\u767a\u8868\u7b49"},"content":{"rendered":"\n<p>Nakanishi K, Kojima K, Sowa Y, Sudo Y. Bidirectional Optical Control of Proton Motive Force in <em>Escherichia coli<\/em> Using Microbial Rhodopsins. <strong><em>J Phys Chem B.<\/em><\/strong> 128(27):6509-6517. (2024) <\/p>\n\n\n\n<p>Kinosita Y, Sowa Y. Flagellar polymorphism-dependent bacterial swimming motility in a structured environment. <strong><em>Biophys Physicobiol.<\/em><\/strong> 20(2):e200024 (2023)<\/p>\n\n\n\n<p>Ridone P, Ishida T, Lin A, Humphreys DT, Giannoulatou E, Sowa Y, Baker MA.<br>The rapid evolution of flagellar ion selectivity in experimental populations of <em>E. coli<\/em>.<br><strong><em>Sci Adv.<\/em><\/strong> (47):eabq2492 (2022)<\/p>\n\n\n\n<p>Tanaka H, Kazuta Y, Naruse Y, Tominari Y, Umehara H, Sowa Y, Sagawa T, Oiwa K, Okada M, Kawagishi I, Kojima H.\u3000<br>Bayesian-based decipherment of in-depth information in bacterial chemical sensing beyond pleasant\/unpleasant responses. <br><strong><em>Sci Rep.<\/em><\/strong> 12(1):2965 (2022)<\/p>\n\n\n\n<p>Islam MI, Bae JH, Ishida T, Ridone P, Lin J, Kelso MJ, Sowa Y, Buckley BJ, Baker MAB. <br>Novel amiloride derivatives that inhibit bacterial motility across multiple strains and<code> <\/code>stator types. <br> <strong><em>J. Bacteriol.<\/em><\/strong> 203(22): e0036721 (2021) <\/p>\n\n\n\n<p>Kinosita Y, Ishida T, Yoshida M, Ito R, Morimoto YV, Goto K, Berry RM, Nishizaka T, Sowa Y. <br>Distinct chemotactic behavior in the original Escherichia coli K-12 depending on forward-and-backward swimming, not on run-tumble movements.<br><strong><em>Sci Rep<\/em>. <\/strong>10(1):15887 (2020) <\/p>\n\n\n\n<p>Onoe S, Yoshida M, Terahara N, Sowa Y. <br>Coupling ion specificity of the flagellar stator proteins MotA1\/MotB1 of <em>Paenibacillus<\/em> sp. TCA20.<br><strong><em>Biomolecules.<\/em><\/strong> 10(7):E1078 (2020)<\/p>\n\n\n\n<p>Hata H, Nishihara Y, Nishiyama M, Sowa Y, Kawagishi I, Kitao A. <br>High pressure inhibits signaling protein binding to the flagellar motor and<code> <\/code>bacterial chemotaxis through enhanced hydration. <br><strong><em>Sci Rep.<\/em><\/strong> 10(1):2351 (2020)<\/p>\n\n\n\n<p>Ishida T, Ito R, Clark J, Matzke NJ, Sowa Y, Baker MAB.<br>Sodium-powered stators of the bacterial flagellar motor can generate torque in the presence of phenamil with mutations near the peptidoglycan-binding region.\u3000<br><strong><em>Mol Microbiol.<\/em><\/strong> 111(6):1689-1699 (20 19)<\/p>\n\n\n\n<p>\u7530\u4e2d\u88d5\u4eba\uff0c\u5c0f\u5d8b\u5bdb\u660e\uff0c\u5bcc\u6210\u5f81\u5f18\uff0c\u7530\u4e2d\u79c0\u5409\uff0c\u5ddd\u5cb8\u90c1\u6717\uff0c\u66fd\u548c\u7fa9\u5e78\uff0e<br>\u5fae\u751f\u7269\u5206\u6790\u88c5\u7f6e\u53ca\u3073\u5fae\u751f\u7269\u5206\u6790\u65b9\u6cd5<br>\u51fa\u9858\u4eba\uff1b\u5b66\u6821\u6cd5\u4eba\u6cd5\u653f\u5927\u5b66\uff0c\u56fd\u7acb\u7814\u7a76\u958b\u767a\u6cd5\u4eba\u60c5\u5831\u901a\u4fe1\u7814\u7a76\u6a5f\u69cb\uff0c\u7279\u8a31\u7b2c6631771\uff0c\u767b\u9332\u65e5\uff1b2019\u5e7412\u670820\u65e5<\/p>\n\n\n\n<p>Yamanaka Y, Winardhi RS, Yamauchi E, Nishiyama SI, Sowa Y, Yan J, Kawagishi I, Ishihama A, Yamamoto K.\u3000<br>Dimerization site 2 of the bacterial DNA-binding protein H-NS is required for gene silencing and<code> <\/code>stiffened nucleoprotein filament formation.\u3000<br><strong><em>J Biol Chem<\/em><\/strong>. 293(24):9496-9505 (2018)<\/p>\n\n\n\n<p>\u66fd\u548c \u7fa9\u5e78\uff0c\u7b20\u4e95 \u5927\u53f8\uff0e<br>\u30d0\u30af\u30c6\u30ea\u30a2\u3079\u3093\u6bdb\u30e2\u30fc\u30bf\u30fc\u306e\u56de\u8ee2\u3092\u6e2c\u308b\uff0c<br>\u751f\u7269\u5de5\u5b66\u4f1a\u8a8c\uff0c96\u5dfb4\u53f7\uff0c183-186(2018)<\/p>\n\n\n\n<p>Nord AL, Sowa Y, Steel BC, Lo CJ, Berry RM.\u3000<br>Speed of the bacterial flagellar motor near zero load depends on the number of stator units.\u3000<br><strong><em>Proc Natl Acad Sci USA<\/em><\/strong>. 114(44):11603-11608 (2017)<\/p>\n\n\n\n<p>Kasai T, Sowa Y<br>Measurements of the Rotation of the Flagellar Motor by Bead Assay. <br><em><strong>Methods Mol Biol<\/strong><\/em> \uff0c1593:185-192 (2017)<\/p>\n\n\n\n<p>Ma Q, Sowa Y, Baker MA, Bai F.<br>Bacterial Flagellar Motor Switch in Response to CheY-P Regulation and<code> <\/code>Motor Structural Alterations.<br><em><strong>Biophys J.<\/strong><\/em> 110(6):1411-20 (2016)<\/p>\n\n\n\n<p>Yamamoto K, Tamai R, Yamazaki M, Inaba T, Sowa Y, Kawagishi I.<br>Substrate-dependent dynamics of the multidrug efflux transporter AcrB of <em>Escherichia coli<\/em>.<br><em><strong>Sci Rep<\/strong><\/em>. 6: 21909 (2016)<\/p>\n\n\n\n<p>Tominaga M, Kawai-Noma S, Kawagishi I, Sowa Y, Saito K, Umeno D.<br>Liquid-based iterative recombineering method tolerant to counter-selection escapes.<br><em><strong>PLoS One<\/strong><\/em> 10(3):e0119818 (2015)<\/p>\n\n\n\n<p>Sowa Y, Homma M, Ishijima A, Berry RM.<br>Hybrid-fuel bacterial flagellar motors <em>in Escherichia coli<\/em>.<br><em><strong>Proc Natl Acad Sci USA<\/strong><\/em>. 111(9):3436-41 (2014)<\/p>\n\n\n\n<p>\u66fd\u548c\u7fa9\u5e78\uff0e<br>\u30d0\u30af\u30c6\u30ea\u30a2\u3079\u3093\u6bdb\u30e2\u30fc\u30bf\u30fc\uff0e<br>1\u5206\u5b50\u751f\u7269\u5b66\uff0c\u539f\u7530\u6176\u6075\u30fb\u77f3\u6e21\u4fe1\u4e00\u7de8\uff0c\u5316\u5b66\u540c\u4eba\uff0c6\u7ae0(2014)<\/p>\n\n\n\n<p>\u66fd\u548c\u7fa9\u5e78\uff0e<br>\u30a8\u30cd\u30eb\u30ae\u30fc\u3092\u4f7f\u3044\u5206\u3051\u308b\u30cf\u30a4\u30d6\u30ea\u30c3\u30c9\u578b\u3079\u3093\u6bdb\u30e2\u30fc\u30bf\u30fc\uff0d\u74b0\u5883\u306b\u9069\u5fdc\u3059\u308b\u30ca\u30ce\u30de\u30b7\u30f3\u306e\u5b9f\u73fe\u306b\u5411\u3051\u3066\uff0e<br>\u5316\u5b66\uff0c\u5316\u5b66\u540c\u4eba\uff0c69(9)\uff0c37-40 (2014)<\/p>\n\n\n\n<p>Bai F, Che Y-S, Kami-ike N, Ma Q, Minamino T, Sowa Y, Namba K.<br>Populational Heterogeneity vs. Temporal Fluctuation in <em>Escherichia coli <\/em>Flagellar Motor Switching.<br><em><strong>Biophys. J<\/strong><\/em><strong>. <\/strong>105(9):2123-9 (2013)<\/p>\n\n\n\n<p>Lo CJ, Sowa Y, Pilizota T, Berry RM.<br>Mechanism and<code> <\/code>kinetics of a sodium-driven bacterial flagellar motor.<br><em><strong>Proc Natl Acad Sci USA<\/strong><\/em>. 110(28):E2544-51 (2013)<\/p>\n\n\n\n<p>Nishiyama M, Sowa Y, Kimura Y, Homma M, Ishijima A, Terazima M.<br>High Hydrostatic Pressure Induces Counterclockwise to Clockwise Reversals of the <em>Escherichia coli<\/em> Flagellar Motor.<br><strong><em>J. Bacteriol<\/em>.<\/strong> 195(8):1809-14 (2013)<\/p>\n\n\n\n<p>\u897f\u5c71\u96c5\u7965\uff0c\u66fd\u548c\u7fa9\u5e78\uff0e<br>\u7d30\u80de\u5185\u306e\u6c34\u3067\u751f\u547d\u6d3b\u52d5\u3092\u64cd\u308b\uff01\uff0d\u9ad8\u5727\u529b\u4e0b\u3067\u89b3\u308b\u30bf\u30f3\u30d1\u30af\u8cea\u6c34\u548c\u5909\u8abf\u30a4\u30e1\u30fc\u30b8\u30f3\u30b0\uff0e<br>\u5316\u5b66\uff0c\u5316\u5b66\u540c\u4eba\uff0c68\uff0c33-38 (2013)<\/p>\n\n\n\n<p>\u6885\u91ce\u592a\u8f14\uff0c\u51a8\u6c38\u5c06\u5927\uff0c\u7530\u4ee3\u6d0b\u5e73\uff0c\u5ddd\u5cb8\u90c1\u6717\uff0c\u66fd\u548c\u7fa9\u5e78\uff0c\u7a32\u8449\u5cb3\u5f66\uff0c\u8521\u6804\u6dd1\uff0e<br>\u9ad8\u901f\u304b\u3064\u9ad8\u52b9\u7387\u306a\u30b2\u30ce\u30e0\u6539\u5909\u6cd5,<br>\u51fa\u9858\u4eba; \u56fd\u7acb\u5927\u5b66\u6cd5\u4eba\u3000\u5343\u8449\u5927\u5b66,\u5b66\u6821\u6cd5\u4eba\u3000\u6cd5\u653f\u5927\u5b66, \u51fa\u9858\u756a\u53f7\uff1b\u7279\u98582012-113083\uff0c2012\u5e745\u670817\u65e5\uff0c\u516c\u958b\u756a\u53f7\uff1b\u7279\u958b2013-17473\uff0c2013\u5e741\u670831\u65e5<\/p>\n\n\n\n<p>Nishiyama M, Sowa Y.<br>Microscopic analysis of bacterial motility at high pressure.<br><em><strong>Biophys. J<\/strong><\/em><strong>.<\/strong> 18;102(8):1872-80 (2012)<\/p>\n\n\n\n<p>Sowa Y, Berry RM.<br>The Rotary Bacterial Flagellar Motor.<br><em><strong>Comprehensive Biphysics<\/strong><\/em> (Edward Egelman ed.), Academic Press, vol. 8 50-71 (2012)<\/p>\n\n\n\n<p>Little MA, Steel BC, Bai F, Sowa Y, Bilyard T, Mueller DM, Berry RM , Jones NS.<br>Steps and<code> <\/code>bumps: precision extraction of discrete States of molecular machines.<br><em><strong>Biophys. J<\/strong><\/em>. 101, 477-85 (2011)<\/p>\n\n\n\n<p>Sowa Y, Steel BC, Berry RM.<br>A simple back-scattering microscope for fast tracking of biological molecules.<br><em><strong>Rev. Sci. Instrum<\/strong><\/em>. 81, 113704 (2010)<\/p>\n\n\n\n<p>Mora T, Yu H, Sowa Y, Wingreen N.<br>Steps in the bacterial flagellar motor.<br><em><strong>PLoS Comput. Biol <\/strong><\/em>5, e1000540 (2009)<\/p>\n\n\n\n<p>Wadhams GH, Sowa, Y.<br>Bacterial flagellar Flagellar Motor.<br><em><strong>Encyclopedia of Life Sciences<\/strong><\/em>, Wiley (2009)<\/p>\n\n\n\n<p>Pilizota T, Sowa Y, Berry RM.<br>Single Molecule Studies of Rotary Proteins.<br><em><strong>Handbook of Single-Molecule Biophysics<\/strong><\/em> (Peter Hinterdorfer, Antoine Van Oijen ed.), Springer (2009)<\/p>\n\n\n\n<p>Inoue Y, Lo C-J, Fukuoka H, Takahashi H, Sowa Y, Pilizota T, Wadhams GH, Homma M, Berry RM, Ishijima A. <br>Torque-speed relationship of Na+-driven chimeric flagellar motoros in <em>Escherichia coli<\/em>. <br><em><strong>J Mol Biol<\/strong><\/em> 376, 1251-9 (2008)<\/p>\n\n\n\n<p>Sowa Y.  Berry RM. <br>The Bacterial Flagellar Motor. <br><em><strong>Single Molecule Biology<\/strong><\/em> (Alex Knight ed.), Academic Press (2008)<\/p>\n\n\n\n<p>Sowa Y, Berry RM. <br>The Bacterial Flagellar Motor. <br><em><strong>Q Review Biophys<\/strong><\/em> 41, 103-32 (2008)<\/p>\n\n\n\n<p>\u77f3\u5cf6\u79cb\u5f66\uff0c\u66fd\u548c\u7fa9\u5e78\uff0c\u4e95\u4e0a\u88d5\u4e00\uff0c\u798f\u5ca1\u5275\uff0c\u7530\u4e2d\u88d5\u4eba\uff0e<br>\u30d0\u30a4\u30aa\u64cd\u4f5c(2) (\u30ec\u30fc\u30b6\u30fc\u306a\u3069\u5149\u30d4\u30f3\u30bb\u30c3\u30c8)\uff0e<br>\u5b9f\u7528 \u7cbe\u5bc6\u4f4d\u7f6e\u6c7a\u3081\u6280\u8853\u4e8b\u5178\uff0c\u7523\u696d\u6280\u8853\u30b5\u30fc\u30d3\u30b9\u30bb\u30f3\u30bf\u30fc\u3000\u7b2c2\u7de8 4-3 (2008)<\/p>\n\n\n\n<p>\u77f3\u5cf6\u79cb\u5f66\uff0c\u4e95\u4e0a\u88d5\u4e00\uff0c\u798f\u5ca1\u5275\uff0c\u7530\u4e2d\u88d5\u4eba\uff0c\u66fd\u548c\u7fa9\u5e78\uff0e<br>\u89b3\u5bdf\u5bfe\u8c61\u3092\u52d5\u304b\u3057\u305f\u308a\u56fa\u5b9a\u3057\u305f\u308a\u3057\u3066\u89b3\u5bdf\u3059\u308b\uff0e<br>\u30ca\u30ce\u30a4\u30e1\u30fc\u30b8\u30f3\u30b0\uff0c\u30a8\u30cc\u30fb\u30c6\u30a3\u30a8\u30b9\u3000\u7b2c4\u7de8\u3000\u7b2c5\u7ae0 (2008)<\/p>\n\n\n\n<p>\u66fd\u548c\u7fa9\u5e78\uff0e<br>[\u7814\u7a76\u5ba4\u8a2a\u554f] \u3044\u307e\u306f\u611b\u5a18\u306b\u5922\u4e2d\uff1f\u30d9\u30ea\u30fc\u7814\u3078\u3088\u3046\u3053\u305d\uff0e<br>\u6700\u65b0\u5206\u5b50\u30ca\u30ce\u30de\u30b7\u30f3\uff0d\u30ca\u30ce\u3067\u50cd\u304f&#8221;\u9ad8\u5ea6\u306a\u6a5f\u68b0&#8221;\u3092\u76ee\u6307\u3057\u3066\uff0c\u5316\u5b66\u540c\u4eba\u3000\u7b2c4\u7ae0\u30004\u7bc0 (2008)<\/p>\n\n\n\n<p>Fukuoka H, Sowa Y, Kojima S, Ishijima A, Homma M. <br>Visualization of functional rotor proteins of the bacterial flagellar motor in the cell membrane. <br><em><strong>J Mol Biol<\/strong><\/em> 367, 692-701 (2007)<\/p>\n\n\n\n<p>\u66fd\u548c\u7fa9\u5e78\uff0c\u798f\u5ca1\u5275\uff0c\u672c\u9593\u9053\u592b\uff0e<br>\u30d0\u30af\u30c6\u30ea\u30a2\u8d85\u5206\u5b50\u30ca\u30ce\u3079\u3093\u6bdb\u30e2\u30fc\u30bf\u30fc\u306e\u56de\u8ee2\u6e2c\u5b9a\uff0e<br>\u86cb\u767d\u8cea\u6838\u9178\u9175\u7d20 52, 309-16 (2007)<\/p>\n\n\n\n<p>\u66fd\u548c\u7fa9\u5e78, \u85ac\u5e2b\u5bff\u6cbb, \u672c\u9593\u9053\u592b, \u77f3\u5cf6\u79cb\u5f66. <br>\u30d0\u30af\u30c6\u30ea\u30a2\u3079\u3093\u6bdb\u30e2\u30fc\u30bf\u30fc\u306e\u30b9\u30c6\u30c3\u30d7\u904b\u52d5. <br>\u751f\u7269\u7269\u7406 46, 341-4 (2006)<\/p>\n\n\n\n<p>\u897f\u5c71\u96c5\u7965, \u66fd\u548c\u7fa9\u5e78, \u77f3\u5cf6\u79cb\u5f66. <br>\u751f\u7269\u5206\u5b50\u30e2\u30fc\u30bf\u30fc\u306e\u30b9\u30c6\u30c3\u30d7\u8a08\u6e2c\u3068\u904b\u52d5\u89e3\u6790. <br>\u7269\u6027\u7814\u7a76 85, 593-621 (2006)<\/p>\n\n\n\n<p>Sowa Y, Rowe AR, Leake MC, Yakushi T, Homma M, Ishijima A, Berry RM.<br>Direct observation of steps in rotation of the bacterial flagellar motor. <br><em><strong>Nature<\/strong><\/em> 437, 916-9 (2005)<\/p>\n\n\n\n<p>Aoki T, Sowa Y, Ide T, Yanagida T. <br>Non-contact surface force microscopy for molecular interaction study.<br><em><strong>e-J. Surf. Sci. Nanotech<\/strong><\/em>. 3, 46-50 (2005)<\/p>\n\n\n\n<p>Aoki T, Sowa Y, Yanagida T. <br>Noncontact surface force microscopy of protein molecules.<em><strong> <\/strong><\/em><br><em><strong>Chemphyschem<\/strong><\/em> 4, 1361-4 (2003)<\/p>\n\n\n\n<p>Sowa Y, Hotta H, Homma M, Ishijima A. <br>Torque-speed relationship of the Na+-driven flagellar motor of <em>Vibrio alginolyticus<\/em>. <br><em><strong>J Mol Biol<\/strong><\/em> 327, 1043-51 (2003)<\/p>\n\n\n\n<p>\u77f3\u5cf6\u79cb\u5f66, \u66fd\u548c\u7fa9\u5e78, \u91ce\u5143\u7ae0\u88d5\uff0e<br>\u4f4d\u76f8\u5dee\u9855\u5fae\u93e1\uff0c<br>\u51fa\u9858\u4eba\uff1b\u79d1\u5b66\u6280\u8853\u632f\u8208\u4e8b\u696d\u56e3\uff0c\u51fa\u9858\u756a\u53f7; \u7279\u98582001-400873, 2001\u5e7412\u670828\u65e5\uff0c\u516c\u958b\u756a\u53f7\uff1b\u7279\u958b2003-195180\uff0c2003\u5e747\u67089\u65e5<\/p>\n\n\n\n<p>Yorimitsu T, Sowa Y, Ishijima A, Yakushi T, Homma M. <br>The systematic substitutions around the conserved changed residues of the cytoplasmic loop of Na+-driven flagellar motor component PomA. <br><em><strong>J Mol Biol <\/strong><\/em>320, 403-13 (2002)<\/p>\n\n\n\n<p>Aoki T, Sowa Y, Yokota H, Hiroshima M, Tokunaga M, Ishii Y, Yanagida T. <br>Non-contact electrostatic surface force imaging of single protein filaments using intermolecular force microscopy. <br><em><strong>Single Molecules <\/strong><\/em>2, 183-90 (2001)<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Nakanishi K, Kojima K, Sowa Y, Sudo Y. Bidirectional Optical Control of Proton Motive Force in Escherichia col &hellip; <a href=\"https:\/\/sowalab.ws.hosei.ac.jp\/wp\/publication\/\">\u7d9a\u304d\u3092\u8aad\u3080 <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-27","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/sowalab.ws.hosei.ac.jp\/wp\/wp-json\/wp\/v2\/pages\/27","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/sowalab.ws.hosei.ac.jp\/wp\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/sowalab.ws.hosei.ac.jp\/wp\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/sowalab.ws.hosei.ac.jp\/wp\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/sowalab.ws.hosei.ac.jp\/wp\/wp-json\/wp\/v2\/comments?post=27"}],"version-history":[{"count":124,"href":"https:\/\/sowalab.ws.hosei.ac.jp\/wp\/wp-json\/wp\/v2\/pages\/27\/revisions"}],"predecessor-version":[{"id":304,"href":"https:\/\/sowalab.ws.hosei.ac.jp\/wp\/wp-json\/wp\/v2\/pages\/27\/revisions\/304"}],"wp:attachment":[{"href":"https:\/\/sowalab.ws.hosei.ac.jp\/wp\/wp-json\/wp\/v2\/media?parent=27"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}